NURAY SÖĞÜNMEZ ERDOĞAN

Dr. Öğr. Üyesi
 NURAY SÖĞÜNMEZ ERDOĞAN

D BLOK 3.KAT 334

+90 (212) 533 65 32 / 1587

[email protected]

CV

Google Scholar

ORCID

LinkedIn

Eğitim

Doktora

KADİR HAS ÜNİVERSİTESİ
Biyoinformatik ve Genetik

Yüksek Lisans

BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik

Lisans

BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik

Araştırma Alanları

  • Tek Hücreli Omik Verileri, Biyoenformatik, Omurga Deformiteleri ve Sinir Sistemi

İş Deneyimi

2015 / 2017 Acıbadem Maslak Hastanesi
Uluslararası Proje Koordinatörü

2019 / 2020 TÜSEB - PYDDB
Uzman

İdari Görevler

Görev Adı Görev Yeri Başlangıç tarihi Bitiş Tarihi
KHAS101 Müfredat Geliştirme Komisyon Eş Başkanı Kadir Has Üniversitesi- Çekirdek Program 01.03.2022
KHAS101- Ders Koordinatörü Kadir Has Üniversitesi- Çekirdek Program 03.01.2022

Yayınlar

  • "Notum1a Inhibition promotes neurogenesis in the adult zebrafish brain",
    Kocagöz, Yigit; Erdogan, Nuray Sogunmez; Ozdinc, Sevval; Ipekgil, Dogac; Katkat, Esra; Ozhan, Gunes; , Scientific Reports, (2026) Vol.16, No.1, DOI: 10.1038/s41598-025-33883-x
  • "pH-Driven β2AR Dynamics Reveal Loop-Mediated Allosteric Communication",
    Sogunmez Erdogan, Nuray; Akten, E. Demet; , ACS Omega, (2026) Vol.11, No.7, 12509-12527 DOI: 10.1021/acsomega.5c12434
  • "Transcriptomic identification and developmental mapping of nrg3b expression in zebrafish",
    Tarahomi, Elham; Erdoğan, Nuray Söğünmez; , Turkish Journal of Biology, (2026) Vol.50, No.1, 81-93 DOI: 10.55730/1300-0152.2791
  • "Transcriptomic identification and developmental mapping of nrg3b expression in zebrafish",
    Söğünmez Erdoğan, Nuray; Tarahomi, Elham; , Transcriptomic identification and developmental mapping of nrg3b expression in zebrafish, (2026) Vol.50, No.1, 81-93 DOI: 10.55730/1300-0152.2791
  • "Notum1a Inhibition promotes neurogenesis in the adult zebrafish brain",
    Söğünmez Erdoğan, Nuray; Kocagöz, Yiğit; Özdinç, Şevval; İpekgil, Doğaç; Katkat, Esra; Özhan, Güneş; , Notum1a Inhibition promotes neurogenesis in the adult zebrafish brain, (2026) Vol.16, No.3824, DOI: 10.1038/s41598-025-33883-x
  • "pH-Driven β2AR Dynamics Reveal Loop-Mediated Allosteric Communication",
    Söğünmez Erdoğan, Nuray; Akten, E. Demet; , pH-Driven β2AR Dynamics Reveal Loop-Mediated Allosteric Communication, (2026) Vol.11, No.7, 12509–12527 DOI: 10.1021/acsomega.5c12434
  • "Multi-omics profiling uncovers LINC00486-associated lncRNA regulation in human traumatic brain injury",
    Al-Rubaye, Tala; Isa, Zenab; Erenkol, Doga; Tarahomi, Elham; Erdogan, Nuray Sogunmez; , Genes and Genomics, (2025) DOI: 10.1007/s13258-025-01687-y
  • "Sparse deconvolution of cell type medleys in spatial transcriptomics",
    Erdogan, Nuray Sogunmez; Eroglu, Deniz; , Plos Computational Biology, (2025) Vol.21, No.6 JUNE, DOI: 10.1371/journal.pcbi.1013169
  • "Sparse Regression-Based Spatial Deconvolution Recovers Cellular Tumor Ecology and Subtypes in Breast Cancer: Methodological Study",
    Söğünmez Erdoğan, Nuray; , Sparse Regression-Based Spatial Deconvolution Recovers Cellular Tumor Ecology and Subtypes in Breast Cancer: Methodological Study, (2025) Vol.17, No.3, 127-139 DOI: 10.5336/biostatic.2025-116000
  • "HB-EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium",
    Sireci, Siran; Kocagöz, Yigit; Alkiraz, Aysu Sevval; Güler, Kardelen; Dokuzluoglu, Zeynep; Balcioglu, Ecem; Meydanli, Sinem; Demirler, Mehmet Can; Erdogan, Nuray Sögünmez; Fuss, Stefan Herbert; , FEBS Journal, (2024) Vol.291, No.10, 2098-2133 DOI: 10.1111/febs.17033
  • "Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets",
    Rinch, Wardah Afzal; Sogunmez, Nuray; Altaf, Aiman; Alsan, Huseyin Fuat; Arsan, Taner; , 2023 Innovations in Intelligent Systems and Applications Conference Asyu 2023, (2023) DOI: 10.1109/ASYU58738.2023.10296679
  • "Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets",
    Afzal Rinch, Wardah ; Sogunmez, Nuray; Altaf, Alman; Alsan, Hüseyin Fuat; Arsan, Taner; , Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets, (2023) DOI: 10.1109/ASYU58738.2023.10296679
  • "HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium",
    Sireci, Siran; Kocagöz, Yigit; Akkiraz, Aysu Şevval; Güler, Kardelen; Dokuzluoglu, Zeynep; Balcioglu, Ecem; Meydanli, Sinem; Demirler, Mehmet Can; Sogunmez Erdogan, Nuray; Fuss, Stefan Herbert; , HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium, (2023) DOI: 10.1111/febs.17033
  • "Information Transfer in Active States of Human β2-Adrenergic Receptor via Inter-Rotameric Motions of Loop Regions",
    Sogunmez, Nuray; Akten, Ebru Demet; , Applied Sciences (Switzerland), (2022) Vol.12, No.17, DOI: 10.3390/app12178530
  • "Distinctive communication networks in inactive states of β2-adrenergic receptor: Mutual information and entropy transfer analysis",
    Sogunmez, Nuray; Akten, Ebru Demet; , Proteins Structure Function and Bioinformatics, (2020) Vol.88, No.11, 1458-1471 DOI: 10.1002/prot.25965
  • "Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis",
    Söğünmez, Nuray; Akten, Demet; , Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis, (2020) DOI: 10.1002/prot.25965
  • "Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β 2 -Adrenergic Receptor",
    Sogunmez, Nuray; Akten, E. Demet; , Journal of Physical Chemistry B, (2019) Vol.123, No.17, 3630-3642 DOI: 10.1021/acs.jpcb.9b01202
  • "Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR)",
    Sogunmez, Nuray; Akten, Demet; , Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR), (2019) DOI: 10.1021/acs.jpcb.9b01202
  • "Diagnosis and Treatment of Congenital Scoliosis",
    , ; , Diagnosis and Treatment of Congenital Scoliosis, (2019)
  • "Relative pelvic version: an individualized pelvic incidence-based proportional parameter that quantifies pelvic version more precisely than pelvic tilt",
    Yilgor, Caglar; Yavuz, Yasemin; Sogunmez, Nuray; Haddad, Sleiman; Mannion, Anne F.; Abul, Kadir; Boissiere, Louis; Obeid, Ibrahim; Kleinstück, Frank; Pérez-Grueso, Francisco Javier Sánchez; Acaroglu, Emre; Pellise, Ferran; Alanay, Ahmet; , Spine Journal, (2018) Vol.18, No.10, 1787-1797 DOI: 10.1016/j.spinee.2018.03.001
  • "Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt",
    , ; , Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt, (2018)
  • "Relative lumbar lordosis and lordosis distribution index: Individualized pelvic incidence-based proportional parameters that quantify lumbar lordosis more precisely than the concept of pelvic incidence minus lumbar lordosis",
    Yilgor, Caglar; Sogunmez, Nuray; Yavuz, Yasemin; Abul, Kadir; Boissiére, Louis; Haddad, Sleiman; Obeid, Ibrahim; Kleinstück, Frank; Pérez-Grueso, Francisco Javier Sánchez; Acaroglu, Emre; Mannion, Anne F.; Pellise, Ferran; Alanay, Ahmet; , Neurosurgical Focus, (2017) Vol.43, No.6, DOI: 10.3171/2017.8.FOCUS17498
  • "Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications after Adult Spinal Deformity Surgery",
    Yilgor, Caglar; Sogunmez, Nuray; Boissiere, Louis; Yavuz, Yasemin; Obeid, Ibrahim; Kleinstück, Frank; Pérez-Grueso, Francisco Javier Sánchez; Acaroglu, Emre; Haddad, Sleiman; Mannion, Anne F.; Pellise, Ferran; Alanay, Ahmet; , Journal of Bone and Joint Surgery American Volume, (2017) Vol.99, No.19, 1661-1672 DOI: 10.2106/JBJS.16.01594
  • "Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis",
    , ; , Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis, (2017)
  • "Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery",
    , ; , Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery, (2017)

Projeler

Proje Adı Görevi Proje Türü Fonlayan Kuruluş Başlangıç Tarihi Bitiş Tarihi
"Beyin Gelisimi Üzerinde Nrg3b'nin Rolünün Zebrabalıgı Modelinde Incelenmesi" Yürütücü Ulusal Proje TÜBİTAK ARDEB 27.10.2025
 27.04.2028
"Glioblastoma multiform beyin kanserindeki ilaç dirençliliği moleküler mekanizmasının tek hücreli RNA ve uzamsal transkriptomik dizileme yöntemleriyle karakterizasyonu" Yürütücü Ulusal Proje Diğer Ulusal 21.03.2025
 21.03.2027
"Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" Yürütücü ARDEB 1001 TÜBİTAK 01.12.2022
 01.12.2025
"Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" Yürütücü Ulusal Proje TÜBİTAK ARDEB 01.12.2022
 01.12.2025

Verilen Dersler

Ders Adı Ders Kodu Dönem
Hücresel Genetik MBG242 2025/26 Bahar
Omiks MBG406 2025/26 Bahar
Nöroenformatiğe Giriş CSE517 2025/26 Güz
Moleküler Biyolojide Modern Teknikler MBG401 2025/26 Güz