Dr. Öğr. Üyesi
NURAY SÖĞÜNMEZ ERDOĞAN
Eğitim
Doktora
KADİR HAS ÜNİVERSİTESİ
Biyoinformatik ve Genetik
Yüksek Lisans
BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik
Lisans
BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik
Araştırma Alanları
- Tek Hücreli Omik Verileri, Biyoenformatik, Omurga Deformiteleri ve Sinir Sistemi
İş Deneyimi
2015 /
2017
Acıbadem Maslak Hastanesi
Uluslararası Proje Koordinatörü
2019 /
2020
TÜSEB - PYDDB
Uzman
İdari Görevler
| Görev Adı | Görev Yeri | Başlangıç tarihi | Bitiş Tarihi |
|---|---|---|---|
| KHAS101 Müfredat Geliştirme Komisyon Eş Başkanı | Kadir Has Üniversitesi- Çekirdek Program | 01.03.2022 | |
| KHAS101- Ders Koordinatörü | Kadir Has Üniversitesi- Çekirdek Program | 03.01.2022 |
Yayınlar
-
"Transcriptomic identification and developmental mapping of nrg3b expression in zebrafish",
Söğünmez Erdoğan, Nuray; Tarahomi, Elham; , Transcriptomic identification and developmental mapping of nrg3b expression in zebrafish, (2026) Vol.50, No.1, 81-93 DOI: 10.55730/1300-0152.2791 -
"Notum1a Inhibition promotes neurogenesis in the adult zebrafish brain",
Söğünmez Erdoğan, Nuray; Kocagöz, Yiğit; Özdinç, Şevval; İpekgil, Doğaç; Katkat, Esra; Özhan, Güneş; , Notum1a Inhibition promotes neurogenesis in the adult zebrafish brain, (2026) Vol.16, No.3824, DOI: 10.1038/s41598-025-33883-x -
"pH-Driven β2AR Dynamics Reveal Loop-Mediated Allosteric Communication",
Söğünmez Erdoğan, Nuray; Akten, E. Demet; , pH-Driven β2AR Dynamics Reveal Loop-Mediated Allosteric Communication, (2026) Vol.11, No.7, 12509–12527 DOI: 10.1021/acsomega.5c12434 -
"Multi-omics profiling uncovers LINC00486-associated lncRNA regulation in human traumatic brain injury",
Al-Rubaye, Tala; Isa, Zenab; Erenkol, Doga; Tarahomi, Elham; Erdogan, Nuray Sogunmez; , Genes and Genomics, (2025) DOI: 10.1007/s13258-025-01687-y -
"Sparse deconvolution of cell type medleys in spatial transcriptomics",
Erdogan, Nuray Sogunmez; Eroglu, Deniz; , Plos Computational Biology, (2025) Vol.21, No.6 JUNE, DOI: 10.1371/journal.pcbi.1013169 -
"Sparse Regression-Based Spatial Deconvolution Recovers Cellular Tumor Ecology and Subtypes in Breast Cancer: Methodological Study",
Söğünmez Erdoğan, Nuray; , Sparse Regression-Based Spatial Deconvolution Recovers Cellular Tumor Ecology and Subtypes in Breast Cancer: Methodological Study, (2025) Vol.17, No.3, 127-139 DOI: 10.5336/biostatic.2025-116000 -
"Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets",
Afzal Rinch, Wardah ; Sogunmez, Nuray; Altaf, Alman; Alsan, Hüseyin Fuat; Arsan, Taner; , Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets, (2023) DOI: 10.1109/ASYU58738.2023.10296679 -
"HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium",
Sireci, Siran; Kocagöz, Yigit; Akkiraz, Aysu Şevval; Güler, Kardelen; Dokuzluoglu, Zeynep; Balcioglu, Ecem; Meydanli, Sinem; Demirler, Mehmet Can; Sogunmez Erdogan, Nuray; Fuss, Stefan Herbert; , HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium, (2023) DOI: 10.1111/febs.17033 -
"Information Transfer in Active States of Human β
2 -Adrenergic Receptor via Inter-Rotameric Motions of Loop Regions",
Sogunmez, Nuray; Akten, Ebru Demet; , Applied Sciences (Switzerland), (2022) Vol.12, No.17, DOI: 10.3390/app12178530 -
"Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis",
Söğünmez, Nuray; Akten, Demet; , Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis, (2020) DOI: 10.1002/prot.25965 -
"Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR)",
Sogunmez, Nuray; Akten, Demet; , Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR), (2019) DOI: 10.1021/acs.jpcb.9b01202 -
"Diagnosis and Treatment of Congenital Scoliosis",
, ; , Diagnosis and Treatment of Congenital Scoliosis, (2019) -
"Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt",
, ; , Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt, (2018) -
"Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis",
, ; , Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis, (2017) -
"Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery",
, ; , Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery, (2017)
Projeler
| Proje Adı | Görevi | Proje Türü | Fonlayan Kuruluş | Başlangıç Tarihi | Bitiş Tarihi |
|---|---|---|---|---|---|
| "Beyin Gelisimi Üzerinde Nrg3b'nin Rolünün Zebrabalıgı Modelinde Incelenmesi" | Yürütücü | Ulusal Proje | TÜBİTAK ARDEB |
27.10.2025 |
27.04.2028 |
| "Glioblastoma multiform beyin kanserindeki ilaç dirençliliği moleküler mekanizmasının tek hücreli RNA ve uzamsal transkriptomik dizileme yöntemleriyle karakterizasyonu" | Yürütücü | Ulusal Proje | Diğer Ulusal |
24.03.2025 |
24.03.2027 |
| "Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" | Yürütücü | ARDEB 1001 | TÜBİTAK |
01.12.2022 |
01.12.2025 |
| "Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" | Yürütücü | Ulusal Proje | TÜBİTAK ARDEB |
01.12.2022 |
01.12.2025 |
Verilen Dersler
| Ders Adı | Ders Kodu | Dönem |
|---|---|---|
| Hücresel Genetik | MBG242 | 2025/26 Bahar |
| Omiks | MBG406 | 2025/26 Bahar |
| Nöroenformatiğe Giriş | CSE517 | 2025/26 Güz |
| Moleküler Biyolojide Modern Teknikler | MBG401 | 2025/26 Güz |