Assistant Professor
NURAY SÖĞÜNMEZ ERDOĞAN
Education
Doctorate
KADİR HAS ÜNİVERSİTESİ
Biyoinformatik ve Genetik
Master's Degree
BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik
Bachelor's Degree
BOĞAZİÇİ ÜNİVERSİTESİ
Moleküler Biyoloji ve Genetik
Research Areas
- Single Cell Omik Data, Bioinformatics, Spinal Deformities and Nervous System
Work Experience
2015 /
2017
Acıbadem Maslak Hastanesi
Uluslararası Proje Koordinatörü
2019 /
2020
TÜSEB - PYDDB
Uzman
Administrative Duties
| Görev Adı | Görev Yeri | Başlangıç tarihi | Bitiş Tarihi |
|---|---|---|---|
| KHAS101 Müfredat Geliştirme Komisyon Eş Başkanı | Kadir Has Üniversitesi- Çekirdek Program | 01.03.2022 | |
| KHAS101-Coordinator | Kadir Has University-Core Program | 03.01.2022 |
Publications
-
"Multi-omics profiling uncovers LINC00486-associated lncRNA regulation in human traumatic brain injury",
Al-Rubaye, Tala; Isa, Zenab; Erenkol, Doga; Tarahomi, Elham; Erdogan, Nuray Sogunmez; , Genes and Genomics, (2025) DOI: 10.1007/s13258-025-01687-y -
"Sparse deconvolution of cell type medleys in spatial transcriptomics",
Erdogan, Nuray Sogunmez; Eroglu, Deniz; , Plos Computational Biology, (2025) Vol.21, No.6 JUNE, DOI: 10.1371/journal.pcbi.1013169 -
"Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets",
Afzal Rinch, Wardah ; Sogunmez, Nuray; Altaf, Alman; Alsan, Hüseyin Fuat; Arsan, Taner; , Deciphering the Cluster-Specific Marker Genes via Integration of Single Cell RNA Sequencing Datasets, (2023) DOI: 10.1109/ASYU58738.2023.10296679 -
"HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium",
Sireci, Siran; Kocagöz, Yigit; Akkiraz, Aysu Şevval; Güler, Kardelen; Dokuzluoglu, Zeynep; Balcioglu, Ecem; Meydanli, Sinem; Demirler, Mehmet Can; Sogunmez Erdogan, Nuray; Fuss, Stefan Herbert; , HB‐EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium, (2023) DOI: 10.1111/febs.17033 -
"Information Transfer in Active States of Human β
2 -Adrenergic Receptor via Inter-Rotameric Motions of Loop Regions",
Sogunmez, Nuray; Akten, Ebru Demet; , Applied Sciences (Switzerland), (2022) Vol.12, No.17, DOI: 10.3390/app12178530 -
"Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis",
Söğünmez, Nuray; Akten, Demet; , Distinctive Allosteric Communication Networks in Inactive States of β2 –Adrenergic Receptor: Mutual Information and Entropy Transfer Analysis, (2020) DOI: 10.1002/prot.25965 -
"Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR)",
Sogunmez, Nuray; Akten, Demet; , Intrinsic Dynamics and Causality in Correlated Motions Unraveled in Two Distinct Inactive States of Human β2 –Adrenergic Receptor (β2AR), (2019) DOI: 10.1021/acs.jpcb.9b01202 -
"Diagnosis and Treatment of Congenital Scoliosis",
, ; , Diagnosis and Treatment of Congenital Scoliosis, (2019) -
"Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt",
, ; , Relative Pelvic Version (RPV): An Individualized Pelvic Incidence-Based Proportional Parameter That Quantifies Pelvic Version More Precisely Than Pelvic Tilt, (2018) -
"Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis",
, ; , Relative Lumbar Lordosis And Lordosis Distribution Index: Individualized Pelvic Incidence– Based Proportional Parameters That Quantify Lumbar Lordosis More Precisely Than The Concept Of Pelvic Incidence Minus Lumbar Lordosis, (2017) -
"Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery",
, ; , Global Alignment and Proportion (GAP) Score: Development and Validation of a New Method of Analyzing Spinopelvic Alignment to Predict Mechanical Complications After Adult Spinal Deformity Surgery, (2017)
Projects
| Project Name | Role in the Project | Project Type | Fund Establishment | Start Date | End Date |
|---|---|---|---|---|---|
| "Beyin Gelisimi Üzerinde Nrg3b'nin Rolünün Zebrabalıgı Modelinde Incelenmesi" | Yürütücü | Ulusal Proje | TÜBİTAK ARDEB |
27.10.2025 |
27.04.2028 |
| "Glioblastoma multiform beyin kanserindeki ilaç dirençliliği moleküler mekanizmasının tek hücreli RNA ve uzamsal transkriptomik dizileme yöntemleriyle karakterizasyonu" | Yürütücü | Ulusal Proje | Diğer Ulusal |
24.03.2025 |
24.03.2027 |
| "Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" | Yürütücü | ARDEB 1001 | TÜBİTAK |
01.12.2022 |
01.12.2025 |
| "Tek Hücreli ve Uzamsal Gen İfadeleri Entegrasyonu ile Memeli Beyni Haritalama ve Nöropatolojilere Özgü Yolak Analizleri" | Yürütücü | Ulusal Proje | TÜBİTAK ARDEB |
01.12.2022 |
01.12.2025 |
Courses Offered
| Course Name | Course Code | Period |
|---|---|---|
| Omics | MBG406 | 2024/25 Spring |
| Virtual Basic Lab | MBG208*2 | 2024/25 Spring |
| Introduction to Neuroinformatics | CSE517 | 2024/25 Fall |
| Modern Techniques in Molecular Biology | MBG401 | 2024/25 Fall |
| Introduction to Neuroinformatics | CSE517 | 2025/26 Fall |
| Modern Techniques in Molecular Biology | MBG401 | 2025/26 Fall |